STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF516Zinc finger protein 516. (993 aa)    
Predicted Functional Partners:
ENSNMLP00000035831
Lysine (K)-specific demethylase 1a.
    
 0.936
ENSNMLP00000010375
Si:ch211-263k4.2.
    
 0.870
ENSNMLP00000010393
Si:ch211-263k4.2.
    
0.870
ENSNMLP00000012382
annotation not available
    
  0.841
KDM1B
Lysine demethylase 1B.
    
  0.833
ENSNMLP00000019570
C-terminal binding protein 1.
    
 
 0.602
ENSNMLP00000030320
C-terminal binding protein 2a.
    
 
 0.602
CTBP2
C-terminal binding protein 2.
    
 
 0.602
ENSNMLP00000042555
C-terminal binding protein 1.
    
 
 0.602
ENSNMLP00000007467
annotation not available
    
  0.593
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.