STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000008556Spalt-like transcription factor 3a. (883 aa)    
Predicted Functional Partners:
ENSNMLP00000010494
POU domain, class 5, transcription factor 3.
   
 0.840
ENSNMLP00000037281
Retinoblastoma binding protein 4.
    
  0.812
RBBP7
RB binding protein 7, chromatin remodeling factor.
    
  0.812
ENSNMLP00000019516
Spalt-like transcription factor 4.
  
 
0.675
ENSNMLP00000015473
annotation not available
    
 0.655
ENSNMLP00000014943
GATA zinc finger domain containing 2Ab.
    
 0.652
ENSNMLP00000022181
GATA zinc finger domain containing 2B.
    
 0.652
ENSNMLP00000025938
annotation not available
    
 0.652
ENSNMLP00000000199
Brain-specific homeobox.
   
 0.627
ENSNMLP00000006663
annotation not available
    
 0.623
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.