STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000008734NudC domain containing 1. (585 aa)    
Predicted Functional Partners:
ENSNMLP00000010862
Coatomer protein complex, subunit alpha.
    
   0.670
ENSNMLP00000019648
DEAQ box RNA-dependent ATPase 1.
    
   0.663
ENSNMLP00000036566
Coatomer protein complex, subunit gamma 2.
    
   0.611
ENSNMLP00000013719
Archain 1b.
   
   0.609
ENSNMLP00000004667
nudC nuclear distribution protein.
   
 
 0.461
ENSNMLP00000027529
SEH1-like (S. cerevisiae).
   
   0.450
ENSNMLP00000000296
Cleavage and polyadenylation specific factor 2.
   
   0.447
ENSNMLP00000009810
Estrogen receptor binding site associated antigen 9.
      
 0.444
ENSNMLP00000043735
NudC domain containing 2.
   
 
 0.430
SMU1
SMU1 DNA replication regulator and spliceosomal factor.
   
   0.423
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.