STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMARCE1SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1. (424 aa)    
Predicted Functional Partners:
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
    
 0.989
ENSNMLP00000023135
annotation not available
    
 0.985
ENSNMLP00000042517
PHD finger protein 10.
   
 0.985
ENSNMLP00000032257
AT rich interactive domain 2 (ARID, RFX-like).
   
 0.984
ENSNMLP00000042030
Polybromo 1, like.
   
 0.984
ENSNMLP00000013280
Bromodomain containing 7.
   
 0.983
ENSNMLP00000002357
Actin-like 6A.
    
 0.976
ENSNMLP00000004764
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2.
   
 0.968
ENSNMLP00000027258
annotation not available
   
 0.967
ENSNMLP00000015851
SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1.
   
 0.961
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.