STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000009157annotation not available (518 aa)    
Predicted Functional Partners:
ENSNMLP00000043020
Pleckstrin homology domain containing, family M, member 3.
 
   
  0.941
ENSNMLP00000024557
UV radiation resistance associated gene.
    
 0.925
ENSNMLP00000009155
annotation not available
 
      0.891
ENSNMLP00000001591
annotation not available
 
      0.877
ENSNMLP00000019263
Microtubule-associated protein 1 light chain 3 gamma.
    
 
 0.746
ENSNMLP00000032262
Phosphatidylinositol 3-kinase, catalytic subunit type 3.
    
 
 0.710
ENSNMLP00000006462
Beclin 1, autophagy related.
    
 
 0.708
ENSNMLP00000019625
VPS39 subunit of HOPS complex.
   
 
 0.529
ENSNMLP00000022286
annotation not available
    
 
 0.488
ENSNMLP00000043705
VPS18 core subunit of CORVET and HOPS complexes.
   
 
 0.488
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.