STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000009305Transient receptor potential cation channel, subfamily M, member 1b. (1510 aa)    
Predicted Functional Partners:
ENSNMLP00000015356
Sodium channel, voltage-gated, type III, beta.
     
 0.776
ENSNMLP00000009348
Sodium channel, voltage-gated, type II, beta.
     
 0.774
ENSNMLP00000009347
Sodium channel, voltage-gated, type IV, beta a.
     
 0.766
ENSNMLP00000034757
Transient receptor potential cation channel, subfamily M, member 2.
     
0.724
MLKL
Mixed lineage kinase domain like pseudokinase.
    
  0.712
ENSNMLP00000022080
Nudix (nucleoside diphosphate linked moiety X)-type motif 9.
 
   
 0.643
ENSNMLP00000000363
annotation not available
    
  0.617
ENSNMLP00000031929
annotation not available
    
  0.617
ENSNMLP00000036600
Protein phosphatase 1, catalytic subunit, alpha isozyme b.
    
  0.617
ENSNMLP00000038247
Protein phosphatase 1, catalytic subunit, alpha isozyme a.
    
  0.617
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.