STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000009365TBC1 domain family, member 20. (391 aa)    
Predicted Functional Partners:
ENSNMLP00000004712
annotation not available
    
 0.892
ENSNMLP00000006684
annotation not available
    
 0.892
ENSNMLP00000019798
RAB1A, member RAS oncogene family b.
    
 0.892
ENSNMLP00000028475
zRAB1B, member RAS oncogene family a.
    
 0.892
ENSNMLP00000002971
RAB33A, member RAS oncogene family.
    
 0.728
ENSNMLP00000023928
RAB33B, member RAS oncogene family a.
    
 0.728
ENSNMLP00000009013
annotation not available
    
 0.701
RAB19
RAB19, member RAS oncogene family.
    
 0.701
ENSNMLP00000002266
annotation not available
    
 0.690
ENSNMLP00000008240
annotation not available
    
 0.690
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.