STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000009673Granulin b. (816 aa)    
Predicted Functional Partners:
ENSNMLP00000020441
Citrate synthase.
   
   0.732
ENSNMLP00000001180
annotation not available
    
   0.726
ENSNMLP00000011326
Chromosome X open reading frame 56.
    
   0.726
ENSNMLP00000040491
Developmentally regulated GTP binding protein 1.
    
   0.726
ENSNMLP00000018417
Developmentally regulated GTP binding protein 2.
    
   0.696
ENSNMLP00000030363
annotation not available
   
 0.693
ENSNMLP00000040624
Cathepsin Z.
   
 0.693
ENSNMLP00000004668
Casein kinase 2, alpha 1 polypeptide.
    
   0.678
ENSNMLP00000006374
Si:dkey-178e17.1.
    
   0.678
ENSNMLP00000013601
annotation not available
    
   0.678
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.