STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000009744Eva-1 homolog C (C. elegans). (385 aa)    
Predicted Functional Partners:
ENSNMLP00000005670
Slit homolog 1b (Drosophila).
    
 
 0.445
ENSNMLP00000013580
Slit homolog 2 (Drosophila).
    
 
 0.445
ENSNMLP00000015763
Nyctalopin.
    
 
 0.445
ENSNMLP00000025496
Slit homolog 3 (Drosophila).
    
 
 0.445
ENSNMLP00000017984
Protein O-fucosyltransferase 2.
      
 0.442
ENSNMLP00000010208
Si:dkey-1j5.4.
    
 
 0.438
ENSNMLP00000000898
BAALC binder of MAP3K1 and KLF4 b.
  
 
   0.420
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.