STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000009928annotation not available (417 aa)    
Predicted Functional Partners:
PTPRC
Protein tyrosine phosphatase receptor type C.
   
 0.686
ENSNMLP00000012392
Protein tyrosine phosphatase non-receptor type 11b.
   
 0.576
ENSNMLP00000018805
Protein tyrosine phosphatase non-receptor type 11a.
   
 0.576
ENSNMLP00000040770
Protein tyrosine phosphatase non-receptor type 6.
   
 0.576
ENSNMLP00000003904
annotation not available
    
  0.564
HABP2
Hyaluronan binding protein 2.
    
  0.564
HABP2-2
Hyaluronan binding protein 2.
    
  0.564
ENSNMLP00000005788
annotation not available
    
  0.564
ENSNMLP00000005836
annotation not available
    
  0.564
ENSNMLP00000028914
annotation not available
    
  0.564
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.