STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000009968macroH2A.2 histone. (358 aa)    
Predicted Functional Partners:
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
  
 0.997
ENSNMLP00000017092
Histone deacetylase 11.
    
 0.914
ENSNMLP00000000133
Histone deacetylase 1.
    
 0.907
ENSNMLP00000023710
annotation not available
    
 0.907
ENSNMLP00000023713
Histone deacetylase 8.
    
 0.907
ENSNMLP00000026092
annotation not available
    
 0.907
ENSNMLP00000002732
Histone deacetylase 5.
    
 0.902
ENSNMLP00000014615
Histone deacetylase 9b.
    
 0.902
ENSNMLP00000019120
Histone deacetylase 6.
    
 0.902
ENSNMLP00000030045
Histone deacetylase 7b.
    
 0.902
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.