STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000010029Danio rerio tudor domain containing 7 b (tdrd7b), mRNA. (897 aa)    
Predicted Functional Partners:
ENSNMLP00000037091
Piwi-like RNA-mediated gene silencing 2.
   
 0.882
ENSNMLP00000043853
Piwi-like RNA-mediated gene silencing 1.
   
 0.878
ENSNMLP00000000859
DEAD (Asp-Glu-Ala-Asp) box helicase 6.
   
 0.835
ENSNMLP00000015281
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.773
ENSNMLP00000012909
Decapping mRNA 2.
    
  0.715
ENSNMLP00000026855
Tudor domain containing 12.
  
 0.710
ENSNMLP00000026551
GA binding protein transcription factor subunit beta 2a.
   
 0.692
ENSNMLP00000035819
annotation not available
   
    0.689
ENSNMLP00000043462
annotation not available
   
    0.689
ENSNMLP00000024058
5'-nucleotidase, ecto (CD73).
    
 0.681
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.