STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000010239Nucleotide-binding oligomerization domain containing 1. (584 aa)    
Predicted Functional Partners:
ENSNMLP00000010782
Receptor-interacting serine-threonine kinase 2.
   
 0.982
ENSNMLP00000027329
annotation not available
    
 0.942
ENSNMLP00000014741
annotation not available
    
 0.927
ENSNMLP00000003766
SGT1 homolog, MIS12 kinetochore complex assembly cochaperone.
    
 0.920
ENSNMLP00000033859
Erbb2 interacting protein.
    
 0.893
ENSNMLP00000031277
ATG5 autophagy related 5 homolog (S. cerevisiae).
     
 0.869
ENSNMLP00000022925
Leucine rich repeat containing 7.
    
 0.864
ENSNMLP00000022929
annotation not available
    
 0.864
ENSNMLP00000005827
ATG12 autophagy related 12 homolog (S. cerevisiae).
     
 0.854
ENSNMLP00000001079
Ribosomal protein S27a.
    
  0.852
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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