STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000010293DEAD (Asp-Glu-Ala-Asp) box helicase 24. (861 aa)    
Predicted Functional Partners:
ENSNMLP00000007442
RNA binding motif protein 28.
   
 0.993
ENSNMLP00000032283
DEAD (Asp-Glu-Ala-Asp) box polypeptide 18.
  
 
0.990
ENSNMLP00000029912
DEAD (Asp-Glu-Ala-Asp) box helicase 56.
  
 
0.988
ENSNMLP00000031591
WD repeat domain 12.
   
 0.987
ENSNMLP00000016867
DEAD (Asp-Glu-Ala-Asp) box polypeptide 52.
  
0.986
ENSNMLP00000032051
NOC2-like nucleolar associated transcriptional repressor.
   
 0.986
ENSNMLP00000028652
Danio rerio pumilio RNA-binding family member 3 (pum3), mRNA.
   
 0.985
ENSNMLP00000012848
NOP14 nucleolar protein homolog (yeast).
   
 0.979
ENSNMLP00000017041
EBNA1 binding protein 2.
   
 0.979
ENSNMLP00000010480
Pescadillo.
   
 0.978
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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