STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000010310Thymocyte nuclear protein 1. (189 aa)    
Predicted Functional Partners:
ENSNMLP00000035705
NADH:ubiquinone oxidoreductase core subunit S7.
     
 0.860
ENSNMLP00000002805
annotation not available
    
  0.850
ENSNMLP00000016584
annotation not available
   
 
  0.727
ENSNMLP00000016592
annotation not available
   
 
  0.727
ENSNMLP00000021213
annotation not available
   
 
  0.727
ENSNMLP00000039178
annotation not available
   
 
  0.727
ENSNMLP00000009465
HIV-1 Tat interactive protein 2.
    
  0.697
ENSNMLP00000016374
Biliverdin reductase B.
    
  0.697
ENSNMLP00000036318
annotation not available
    
  0.697
ENSNMLP00000039855
Transmembrane protein 254.
    
  0.697
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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