STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000010395Ataxin 3. (271 aa)    
Predicted Functional Partners:
ENSNMLP00000001079
Ribosomal protein S27a.
    
 0.962
ENSNMLP00000001704
Ubiquitin B.
    
 0.961
ENSNMLP00000008658
Zgc:136908.
    
 0.948
ENSNMLP00000013454
Valosin containing protein.
    
 0.948
ENSNMLP00000037251
annotation not available
    
 0.930
ENSNMLP00000037256
annotation not available
    
 0.930
ENSNMLP00000005729
Spermatogenesis associated 5-like 1.
    
 0.928
SPATA5
Spermatogenesis associated 5.
    
 0.928
ENSNMLP00000006462
Beclin 1, autophagy related.
    
 0.926
ENSNMLP00000038420
Ataxin 2.
    
 0.918
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.