STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000010412Nuclear receptor subfamily 0, group B, member 2a. (254 aa)    
Predicted Functional Partners:
ENSNMLP00000002135
Nuclear receptor subfamily 5, group A, member 2.
   
0.935
ENSNMLP00000018997
Nuclear receptor subfamily 5, group A, member 1a.
   
0.935
ENSNMLP00000011401
Nuclear receptor subfamily 5, group A, member 5.
   
0.899
ENSNMLP00000015222
Hepatocyte nuclear factor 4, gamma.
   
0.826
ENSNMLP00000040754
Hepatocyte nuclear factor 4, alpha.
   
0.826
PPARG
Peroxisome proliferator activated receptor gamma.
   
 0.813
PPARA
Peroxisome proliferator activated receptor alpha.
   
 0.812
ENSNMLP00000042701
Peroxisome proliferator-activated receptor alpha a.
   
 0.781
TADA1
Transcriptional adaptor 1.
    
 0.773
ENSNMLP00000022737
Mediator complex subunit 1.
    
 0.753
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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