STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000010462Programmed cell death 7. (449 aa)    
Predicted Functional Partners:
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
   
 0.966
ENSNMLP00000021796
Zinc finger, matrin-type 5.
   
 0.953
ENSNMLP00000033799
Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2.
    
  0.951
ENSNMLP00000026891
Small nuclear ribonucleoprotein 35 (U11/U12).
    
 0.943
ENSNMLP00000038845
Small nuclear ribonucleoprotein 70 (U1).
    
 0.943
ENSNMLP00000035266
annotation not available
    
  0.916
ENSNMLP00000009043
Zinc finger CCHC-type and RNA binding motif 1.
    
 0.913
ENSNMLP00000019469
Small nuclear ribonucleoprotein polypeptide E.
    
  0.909
ENSNMLP00000009434
Small nuclear ribonucleoprotein polypeptide G.
    
  0.907
ENSNMLP00000015446
Small nuclear ribonucleoprotein 48 (U11/U12).
   
 0.897
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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