STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000011143Si:dkey-183j2.10. (490 aa)    
Predicted Functional Partners:
ENSNMLP00000015356
Sodium channel, voltage-gated, type III, beta.
   
 
  0.771
CACNG2
Calcium voltage-gated channel auxiliary subunit gamma 2.
     
 0.767
ENSNMLP00000009813
Sodium channel, voltage-gated, type IV, alpha, a.
     
 0.761
ENSNMLP00000007428
annotation not available
 
  
 0.618
ENSNMLP00000009347
Sodium channel, voltage-gated, type IV, beta a.
     
 0.562
ENSNMLP00000025147
annotation not available
  
 
0.535
ENSNMLP00000031864
Glutamate receptor, ionotropic, AMPA 2b.
  
 
0.530
ENSNMLP00000001224
Glutamate receptor, ionotropic, N-methyl D-aspartate 1a.
    
0.490
ENSNMLP00000001275
annotation not available
    
 0.490
ENSNMLP00000017873
SET binding protein 1.
     
 0.447
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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