STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000011649Coiled-coil domain containing 12. (183 aa)    
Predicted Functional Partners:
ENSNMLP00000012620
Cell division cycle 40 homolog (S. cerevisiae).
    
  0.998
ENSNMLP00000033230
pre-mRNA processing factor 19.
    
  0.995
ENSNMLP00000017042
Crooked neck pre-mRNA splicing factor 1.
    
  0.990
ENSNMLP00000040451
Elongation factor Tu GTP binding domain containing 2.
    
  0.988
ENSNMLP00000013899
BUD31 homolog.
   
  0.982
WDR25
WD repeat domain 25.
    
  0.981
ENSNMLP00000027485
SYF2 pre-mRNA-splicing factor.
    
  0.977
ENSNMLP00000030019
annotation not available
   
 0.965
ENSNMLP00000016967
Peptidylprolyl isomerase (cyclophilin)-like 1.
   
 0.961
ENSNMLP00000042123
G patch domain containing 1.
    
 0.958
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.