STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000011719Zinc finger protein 618. (1018 aa)    
Predicted Functional Partners:
ENSNMLP00000019886
Chromodomain helicase DNA binding protein 1.
    
 0.575
ENSNMLP00000004721
SLIT and NTRK-like family, member 6.
      
 0.516
ENSNMLP00000005687
Microfibril associated protein 5.
      
 0.507
ENSNMLP00000044764
PHD finger protein 14.
      
 0.477
ENSNMLP00000002648
annotation not available
    
  0.464
ENSNMLP00000022695
Potassium channel tetramerization domain containing 2.
    
  0.464
ENSNMLP00000035600
Ubiquitin-conjugating enzyme E2Ia.
    
  0.464
ENSNMLP00000023498
annotation not available
  
     0.463
ENSNMLP00000040637
Sorting nexin 24.
    
   0.439
ENSNMLP00000006239
Casein kinase 1, alpha 1.
    
   0.434
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.