STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000011868Cadherin 13, H-cadherin (heart). (653 aa)    
Predicted Functional Partners:
ENSNMLP00000041888
Catenin (cadherin-associated protein), beta 1.
    
 0.917
ENSNMLP00000042551
annotation not available
 
   
 0.916
ENSNMLP00000008892
annotation not available
    
 0.871
ENSNMLP00000023688
Junction plakoglobin a.
    
 0.871
ENSNMLP00000020112
Catenin (cadherin-associated protein), alpha 1.
    
 0.866
ENSNMLP00000027198
Catenin (cadherin-associated protein), alpha 2.
    
 0.866
ENSNMLP00000009320
Cadherin 22.
     
0.850
ENSNMLP00000011306
annotation not available
    
 0.849
ENSNMLP00000020422
annotation not available
     
 0.848
ENSNMLP00000000632
annotation not available
     
0.845
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.