STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000012087Zinc finger, MYND-type containing 10. (448 aa)    
Predicted Functional Partners:
ENSNMLP00000010236
annotation not available
   
 0.998
ENSNMLP00000012032
NPR2 like, GATOR1 complex subunit.
 
    
 0.793
IFT122
Intraflagellar transport 122.
   
 0.752
ENSNMLP00000001792
annotation not available
   
 0.743
ENSNMLP00000022993
Calcium channel, voltage-dependent, gamma subunit 1b.
    
 0.731
ENSNMLP00000030630
Calcium channel, voltage-dependent, gamma subunit 1a.
    
 0.731
RSPH1
Radial spoke head component 1.
   
 
 0.722
ENSNMLP00000009348
Sodium channel, voltage-gated, type II, beta.
    
 0.710
ENSNMLP00000029510
annotation not available
    
 0.710
ENSNMLP00000034106
Leucine rich repeat containing 6.
    
 0.697
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.