STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000012275Polymerase (DNA directed), beta. (326 aa)    
Predicted Functional Partners:
ENSNMLP00000000301
X-ray repair complementing defective repair in Chinese hamster cells 1.
   
 0.986
ENSNMLP00000030880
Polynucleotide kinase 3'-phosphatase.
    
 0.961
ENSNMLP00000012118
Poly (ADP-ribose) polymerase 2.
    
 0.931
ENSNMLP00000042262
APEX nuclease (multifunctional DNA repair enzyme) 1.
    
 0.931
ENSNMLP00000008690
Nei-like DNA glycosylase 1.
   
 0.901
ENSNMLP00000003746
Ligase I, DNA, ATP-dependent.
  
 0.889
ENSNMLP00000037576
Ligase I, DNA, ATP-dependent.
  
 0.889
ENSNMLP00000020285
tyrosyl-DNA phosphodiesterase 1.
    
 
 0.886
ENSNMLP00000035309
Ligase IV, DNA, ATP-dependent.
  
 0.881
ENSNMLP00000038536
Deoxynucleotidyltransferase, terminal.
  
  
0.871
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.