STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000012589Leukocyte receptor cluster (LRC) member 1. (277 aa)    
Predicted Functional Partners:
ENSNMLP00000011326
Chromosome X open reading frame 56.
    
  0.860
ENSNMLP00000012620
Cell division cycle 40 homolog (S. cerevisiae).
    
 0.855
ENSNMLP00000013108
XPA binding protein 2.
   
 0.849
ENSNMLP00000033230
pre-mRNA processing factor 19.
    
 0.848
ENSNMLP00000030942
SNW domain containing 1.
    
 0.845
ENSNMLP00000031101
annotation not available
    
 0.845
ENSNMLP00000036843
annotation not available
    
 0.845
ENSNMLP00000027485
SYF2 pre-mRNA-splicing factor.
    
 0.842
ENSNMLP00000017042
Crooked neck pre-mRNA splicing factor 1.
   
 0.833
ENSNMLP00000024835
Nucleoporin 107.
   
 0.827
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.