STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000012652Ubiquitin-conjugating enzyme E2B (RAD6 homolog). (152 aa)    
Predicted Functional Partners:
ENSNMLP00000033431
Ubiquitin-conjugating enzyme E2 variant 1.
   
 0.997
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.986
ENSNMLP00000042349
annotation not available
    
 0.985
ENSNMLP00000038463
Ubiquitin-like modifier activating enzyme 7.
   
 0.971
ENSNMLP00000033507
Ring finger protein 20, E3 ubiquitin protein ligase.
    
 0.958
ENSNMLP00000036234
Ring finger protein 40.
    
 0.958
ENSNMLP00000001079
Ribosomal protein S27a.
    
 0.952
ENSNMLP00000001704
Ubiquitin B.
   
 0.950
ENSNMLP00000001136
annotation not available
    
 0.947
ENSNMLP00000017213
Ubiquitin-conjugating enzyme E2 variant 2.
   
 0.924
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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