STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000012824Sphingomyelin phosphodiesterase 4. (882 aa)    
Predicted Functional Partners:
ENSNMLP00000021674
Sphingomyelin phosphodiesterase 3.
     
 0.925
ENSNMLP00000015440
Sphingomyelin phosphodiesterase 2b.
     
 0.923
ENSNMLP00000012898
Sphingomyelin phosphodiesterase 5.
     
 0.915
ENSNMLP00000020350
Sphingomyelin phosphodiesterase acid like 3B.
     
 0.889
ENSNMLP00000012440
N-acylsphingosine amidohydrolase (acid ceramidase) 1b.
     
 0.877
ENSNMLP00000014580
Alkaline ceramidase 2.
     
 0.868
ENSNMLP00000015084
Delta(4)-desaturase, sphingolipid 1.
     
 0.868
ENSNMLP00000028603
Delta(4)-desaturase, sphingolipid 2.
     
 0.868
ENSNMLP00000006766
UDP-glucose ceramide glucosyltransferase.
     
 0.867
ENSNMLP00000032160
Glucosidase, beta (bile acid) 2.
     
 0.867
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.