STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000012883DEAH (Asp-Glu-Ala-His) box polypeptide 38. (1247 aa)    
Predicted Functional Partners:
ENSNMLP00000012620
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.999
ENSNMLP00000039412
YJU2 splicing factor homolog.
   
 0.998
ENSNMLP00000008599
CWC25 spliceosome associated protein homolog.
    
 0.997
ENSNMLP00000042593
SLU7 homolog, splicing factor.
   
 0.997
ENSNMLP00000013108
XPA binding protein 2.
   
 0.995
ENSNMLP00000013899
BUD31 homolog.
    
 0.995
ENSNMLP00000017042
Crooked neck pre-mRNA splicing factor 1.
   
 0.995
ENSNMLP00000033230
pre-mRNA processing factor 19.
   
 0.995
ENSNMLP00000005926
pre-mRNA processing factor 8.
   
 0.994
ENSNMLP00000007394
ISY1 splicing factor homolog.
    
 0.994
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.