STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000013229Chromatin modifying protein 1B. (199 aa)    
Predicted Functional Partners:
ENSNMLP00000024472
Charged multivesicular body protein 2A.
   
0.993
ENSNMLP00000025418
Vesicle (multivesicular body) trafficking 1.
    
 0.992
ENSNMLP00000014121
Charged multivesicular body protein 3.
 
 
 0.991
ENSNMLP00000019279
Transmembrane 9 superfamily member 1.
    
 0.983
ENSNMLP00000028684
Vacuolar protein sorting 4 homolog A.
   
 0.975
VPS4B
Vacuolar protein sorting 4 homolog B.
   
 0.974
ENSNMLP00000022092
annotation not available
   
 0.971
ENSNMLP00000027376
Charged multivesicular body protein 5b.
   
 0.968
ENSNMLP00000036181
Charged multivesicular body protein 5a.
   
 0.968
ENSNMLP00000001411
annotation not available
    
 
 0.962
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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