STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000013383TOX high mobility group box family member 3. (498 aa)    
Predicted Functional Partners:
ENSNMLP00000023395
Actin related protein 8.
    
 0.823
ENSNMLP00000040055
General transcription factor IIH, polypeptide 1.
    
 0.789
ENSNMLP00000028832
General transcription factor IIH, polypeptide 3.
    
 0.785
ENSNMLP00000029148
RuvB-like AAA ATPase 1.
    
 0.774
ENSNMLP00000019433
Actin related protein 5.
    
 0.756
ENSNMLP00000002357
Actin-like 6A.
   
 0.752
ENSNMLP00000016621
annotation not available
   
 0.737
ENSNMLP00000038786
H2A.Z variant histone 2a.
   
 0.737
ENSNMLP00000014464
Polymerase (RNA) mitochondrial (DNA directed).
    
 0.736
ENSNMLP00000028878
General transcription factor IIH, polypeptide 2.
   
 0.732
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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