STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VANGL1VANGL planar cell polarity protein 1. (538 aa)    
Predicted Functional Partners:
ENSNMLP00000020161
Dishevelled segment polarity protein 2.
    
 0.969
ENSNMLP00000040707
Prickle homolog 2b.
    
 0.965
PRICKLE1
Prickle planar cell polarity protein 1.
    
 0.964
ENSNMLP00000009032
Prickle homolog 1b.
    
 0.962
ENSNMLP00000024234
Prickle homolog 2a.
    
 0.962
ENSNMLP00000042908
Dishevelled segment polarity protein 1a.
    
 0.960
ENSNMLP00000014268
Prickle homolog 3.
    
 0.951
ENSNMLP00000005004
annotation not available
    
 0.949
ENSNMLP00000015643
Dishevelled segment polarity protein 3a.
    
 0.949
ENSNMLP00000028343
annotation not available
  
  
 
0.838
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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