STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000013774Si:ch211-248l17.3. (539 aa)    
Predicted Functional Partners:
ENSNMLP00000012230
Ribosomal RNA processing 36.
      
 0.547
ENSNMLP00000017626
Kelch repeat and BTB (POZ) domain containing 12.
      
 0.545
ENSNMLP00000017623
annotation not available
      
 0.534
ENSNMLP00000037187
annotation not available
      
 0.522
ENSNMLP00000001738
Trafficking protein particle complex 6b-like.
      
 0.518
TMEM43
Transmembrane protein 43.
      
 0.508
ENSNMLP00000028788
Protein kinase domain containing, cytoplasmic b.
      
 0.485
ENSNMLP00000027049
annotation not available
   
  
 0.467
ENSNMLP00000035526
annotation not available
   
  
 0.467
ENSNMLP00000039707
Von Willebrand factor C domain containing 2.
      
 0.454
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.