STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000013958Iroquois homeobox 3a. (429 aa)    
Predicted Functional Partners:
ENSNMLP00000013779
Translocase of outer mitochondrial membrane 20.
    
 
 0.687
ENSNMLP00000013963
Iroquois homeobox 5a.
  
  
0.658
ENSNMLP00000040282
Iroquois homeobox 2a.
  
  
0.650
ENSNMLP00000010167
Teashirt zinc finger homeobox 3b.
    
 0.616
ENSNMLP00000019502
Teashirt zinc finger homeobox 2.
    
 0.610
ENSNMLP00000003251
annotation not available
    
 0.604
ENSNMLP00000015688
pre-B-cell leukemia transcription factor 4.
    
 0.604
ENSNMLP00000020905
pre-B-cell leukemia homeobox 1a.
    
 0.604
ENSNMLP00000026845
annotation not available
    
 0.604
ENSNMLP00000026847
annotation not available
    
 0.604
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.