STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000014187F-box and WD repeat domain containing 4. (389 aa)    
Predicted Functional Partners:
ENSNMLP00000015878
Cullin 1a.
    
 0.917
ENSNMLP00000013916
S-phase kinase-associated protein 1.
    
 0.901
CUL3
Cullin 3.
    
  0.826
ENSNMLP00000030280
Cullin 3b.
    
  0.826
ENSNMLP00000005029
CDK2 associated cullin domain 1.
    
  0.795
ENSNMLP00000008488
Chaperonin containing TCP1, subunit 4 (delta).
    
 0.776
ENSNMLP00000033009
Chaperonin containing TCP1, subunit 5 (epsilon).
    
 0.762
ENSNMLP00000032818
Chaperonin containing TCP1, subunit 3 (gamma).
    
 0.753
ENSNMLP00000033136
Thioredoxin domain containing 9.
    
   0.745
ENSNMLP00000033672
Chaperonin containing TCP1, subunit 7 (eta).
    
 0.730
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.