STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000014213RNA binding motif protein 47. (612 aa)    
Predicted Functional Partners:
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
    
   0.806
ENSNMLP00000017533
Heterogeneous nuclear ribonucleoprotein K.
   
 0.794
ENSNMLP00000019215
Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2b.
     
 0.745
ENSNMLP00000034357
Apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a.
     
 0.745
ENSNMLP00000015281
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 0.723
ENSNMLP00000014583
Ribosomal protein S6.
   
 
 0.685
ENSNMLP00000037698
Nuclear cap binding protein subunit 2.
    
 0.685
ENSNMLP00000040917
Transformer 2 beta homolog.
   
 0.684
ENSNMLP00000044254
Vir like m6A methyltransferase associated.
    
 0.676
RPS20
Ribosomal protein S20.
   
   0.671
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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