ENSNMLP00000014458 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000014458

annotation not available (291 aa)

Predicted Functional Partners:

ENSNMLP00000017039

0.962

ENSNMLP00000000049

0.958

ENSNMLP00000003517

0.957

ENSNMLP00000024238

0.953

ENSNMLP00000040396

0.951

ENSNMLP00000019322

0.949

ENSNMLP00000004341

0.948

ENSNMLP00000037747

0.948

ENSNMLP00000019534

0.935

ENSNMLP00000037743

0.935

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000000049	ENSNMLP00000003517	annotation not available	annotation not available	0.950
ENSNMLP00000000049	ENSNMLP00000004341	annotation not available	annotation not available	0.938
ENSNMLP00000000049	ENSNMLP00000014458	annotation not available	annotation not available	0.958
ENSNMLP00000000049	ENSNMLP00000017039	annotation not available	annotation not available	0.929
ENSNMLP00000000049	ENSNMLP00000019322	annotation not available	annotation not available	0.952
ENSNMLP00000000049	ENSNMLP00000019534	annotation not available	annotation not available	0.931
ENSNMLP00000000049	ENSNMLP00000024238	annotation not available	annotation not available	0.950
ENSNMLP00000000049	ENSNMLP00000037747	annotation not available	annotation not available	0.932
ENSNMLP00000000049	ENSNMLP00000040396	annotation not available	annotation not available	0.640
ENSNMLP00000003517	ENSNMLP00000000049	annotation not available	annotation not available	0.950
ENSNMLP00000003517	ENSNMLP00000004341	annotation not available	annotation not available	0.531
ENSNMLP00000003517	ENSNMLP00000014458	annotation not available	annotation not available	0.957
ENSNMLP00000003517	ENSNMLP00000017039	annotation not available	annotation not available	0.949
ENSNMLP00000003517	ENSNMLP00000019322	annotation not available	annotation not available	0.947
ENSNMLP00000003517	ENSNMLP00000019534	annotation not available	annotation not available	0.930
ENSNMLP00000003517	ENSNMLP00000037747	annotation not available	annotation not available	0.895
ENSNMLP00000003517	ENSNMLP00000040396	annotation not available	annotation not available	0.938
ENSNMLP00000004341	ENSNMLP00000000049	annotation not available	annotation not available	0.938
ENSNMLP00000004341	ENSNMLP00000003517	annotation not available	annotation not available	0.531
ENSNMLP00000004341	ENSNMLP00000014458	annotation not available	annotation not available	0.948