STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000014602Aprataxin. (339 aa)    
Predicted Functional Partners:
ENSNMLP00000000301
X-ray repair complementing defective repair in Chinese hamster cells 1.
    
 
 0.864
ENSNMLP00000028065
annotation not available
    
 
 0.864
ENSNMLP00000020285
tyrosyl-DNA phosphodiesterase 1.
    
 
 0.752
ENSNMLP00000027592
Ribonucleic acid export 1.
   
    0.741
ENSNMLP00000018789
Eukaryotic translation initiation factor 2B, subunit 1 alpha.
   
    0.732
ENSNMLP00000012118
Poly (ADP-ribose) polymerase 2.
   
 
 0.710
ENSNMLP00000035309
Ligase IV, DNA, ATP-dependent.
   
 
 0.701
ENSNMLP00000012275
Polymerase (DNA directed), beta.
   
 
 0.655
ENSNMLP00000024157
8-oxoguanine DNA glycosylase.
    
 
 0.624
ENSNMLP00000033846
Exonuclease 1.
   
 
 0.616
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.