STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000014764Rhomboid, veinlet-like 3 (Drosophila). (412 aa)    
Predicted Functional Partners:
CASK
Calcium/calmodulin dependent serine protein kinase.
   
 0.856
ENSNMLP00000022162
annotation not available
   
 0.844
ENSNMLP00000038996
annotation not available
   
 0.844
ENSNMLP00000038998
Myosin IIIB.
   
 0.844
ENSNMLP00000003100
Wu:fi36a10.
  
 0.781
ENSNMLP00000010135
annotation not available
  
 0.781
ENSNMLP00000042449
Membrane associated guanylate kinase, WW and PDZ domain containing 3b.
  
 0.781
ENSNMLP00000042450
annotation not available
  
 0.781
ENSNMLP00000040742
Myosin IXb.
    
 0.700
ENSNMLP00000029992
Nudix (nucleoside diphosphate linked moiety X)-type motif 12.
  
 0.663
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.