STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000014883Matrix metallopeptidase 20a (enamelysin). (460 aa)    
Predicted Functional Partners:
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.883
TIMP2
TIMP metallopeptidase inhibitor 2.
   
 0.845
ENSNMLP00000016454
TIMP metallopeptidase inhibitor 2b.
   
 0.843
ENSNMLP00000027962
Matrix metallopeptidase 9.
   
0.691
ENSNMLP00000010799
annotation not available
     
 0.644
ENSNMLP00000021506
Heparin-binding EGF-like growth factor a.
    
  0.644
ENSNMLP00000022738
annotation not available
     
 0.643
ENSNMLP00000005720
Cytochrome b-245, alpha polypeptide.
     
 0.628
ENSNMLP00000017016
Neutrophil cytosolic factor 4.
     
 0.628
ENSNMLP00000006986
annotation not available
  
0.623
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.