STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000014887Fin bud initiation factor b. (198 aa)    
Predicted Functional Partners:
ENSNMLP00000010168
Zinc finger protein 536.
      
 0.548
ENSNMLP00000044991
Upper zone of growth plate and cartilage matrix associated b.
      
 0.541
ENSNMLP00000010339
annotation not available
      
 0.491
ENSNMLP00000039998
CD81 molecule b.
      
 0.491
ENSNMLP00000040033
Secretion regulating guanine nucleotide exchange factor.
      
 0.487
ENSNMLP00000016468
TBC1 domain family, member 15.
      
 0.477
ENSNMLP00000039985
Anoctamin 9a.
      
 0.470
ENSNMLP00000011348
Adenosine monophosphate deaminase 3a.
      
 0.414
ENSNMLP00000026483
annotation not available
      
 0.414
ENSNMLP00000013392
Transmembrane protein 204.
  
   
 0.407
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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