ENSNMLP00000015747 protein (Neogobius melanostomus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSNMLP00000015747

annotation not available (126 aa)

Predicted Functional Partners:

ENSNMLP00000015267

0.980

ENSNMLP00000033287

0.978

ENSNMLP00000034101

0.977

ENSNMLP00000006768

0.974

ENSNMLP00000026915

0.973

ENSNMLP00000000443

0.972

ENSNMLP00000021456

0.972

ENSNMLP00000024095

0.971

ENSNMLP00000009840

0.968

ENSNMLP00000007564

0.966

Your Current Organism:

Neogobius melanostomus

NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
ENSNMLP00000000443	ENSNMLP00000006768	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein L58.	0.990
ENSNMLP00000000443	ENSNMLP00000007564	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein L51.	0.974
ENSNMLP00000000443	ENSNMLP00000009840	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein L43.	0.993
ENSNMLP00000000443	ENSNMLP00000015267	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein L40.	0.994
ENSNMLP00000000443	ENSNMLP00000015747	Mitochondrial ribosomal protein L36.	annotation not available	0.972
ENSNMLP00000000443	ENSNMLP00000021456	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein L46.	0.993
ENSNMLP00000000443	ENSNMLP00000024095	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein S25.	0.981
ENSNMLP00000000443	ENSNMLP00000026915	Mitochondrial ribosomal protein L36.	annotation not available	0.999
ENSNMLP00000000443	ENSNMLP00000033287	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein L52.	0.928
ENSNMLP00000000443	ENSNMLP00000034101	Mitochondrial ribosomal protein L36.	Mitochondrial ribosomal protein S16.	0.999
ENSNMLP00000006768	ENSNMLP00000000443	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein L36.	0.990
ENSNMLP00000006768	ENSNMLP00000007564	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein L51.	0.933
ENSNMLP00000006768	ENSNMLP00000009840	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein L43.	0.949
ENSNMLP00000006768	ENSNMLP00000015267	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein L40.	0.981
ENSNMLP00000006768	ENSNMLP00000015747	Mitochondrial ribosomal protein L58.	annotation not available	0.974
ENSNMLP00000006768	ENSNMLP00000021456	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein L46.	0.977
ENSNMLP00000006768	ENSNMLP00000024095	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein S25.	0.947
ENSNMLP00000006768	ENSNMLP00000026915	Mitochondrial ribosomal protein L58.	annotation not available	0.999
ENSNMLP00000006768	ENSNMLP00000033287	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein L52.	0.936
ENSNMLP00000006768	ENSNMLP00000034101	Mitochondrial ribosomal protein L58.	Mitochondrial ribosomal protein S16.	0.993