STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000015834Phosphodiesterase 6D, cGMP-specific, rod, delta. (155 aa)    
Predicted Functional Partners:
ENSNMLP00000033185
ADP-ribosylation factor-like 2.
    
 0.980
ENSNMLP00000035382
annotation not available
    
 
 0.951
ENSNMLP00000008470
annotation not available
   
 0.938
ENSNMLP00000036050
ADP ribosylation factor like GTPase 3b.
   
 0.938
ENSNMLP00000036000
Inositol polyphosphate-5-phosphatase E.
    
 0.936
ENSNMLP00000036952
ADP ribosylation factor like GTPase 3, like 2.
   
 0.895
PDE6G
Phosphodiesterase 6G.
     
 0.884
ENSNMLP00000026183
ADP-ribosylation factor-like 13b.
     
 0.883
ENSNMLP00000030075
Guanylate cyclase 1 soluble subunit beta 1.
    
 0.880
ENSNMLP00000036950
annotation not available
    
 0.879
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.