STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000015837RNA binding protein, mRNA processing factor 2a. (288 aa)    
Predicted Functional Partners:
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.823
ENSNMLP00000025912
FAU ubiquitin like and ribosomal protein S30 fusion a.
   
  0.767
ENSNMLP00000020024
Myb-like, SWIRM and MPN domains 1.
   
 0.738
YTHDC2
YTH domain containing 2.
   
 0.713
ENSNMLP00000029091
RNA binding protein, mRNA processing factor.
  
  
0.710
ENSNMLP00000019469
Small nuclear ribonucleoprotein polypeptide E.
   
 0.677
ENSNMLP00000035266
annotation not available
   
 0.669
ENSNMLP00000009434
Small nuclear ribonucleoprotein polypeptide G.
   
 0.668
ENSNMLP00000007022
Telomerase reverse transcriptase.
    
 0.661
ENSNMLP00000003253
RNA binding fox-1 homolog 2.
   
 
 0.655
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.