STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000015878Cullin 1a. (776 aa)    
Predicted Functional Partners:
ENSNMLP00000013790
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.999
ENSNMLP00000013916
S-phase kinase-associated protein 1.
   
 0.999
ENSNMLP00000017936
S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.
    
 0.999
ENSNMLP00000020539
UBX domain protein 7.
   
 0.995
ENSNMLP00000029725
F-box and WD repeat domain containing 11a.
   
 0.995
ENSNMLP00000038652
F-box and leucine-rich repeat protein 17.
    
 0.986
ENSNMLP00000022138
COP9 signalosome subunit 5.
   
 0.984
ENSNMLP00000033246
annotation not available
    
 0.983
ENSNMLP00000033644
NEDD8 ubiquitin like modifier, like.
    
 0.983
ENSNMLP00000016493
annotation not available
   
 0.980
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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