STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000016142Transmembrane 6 superfamily member 2. (381 aa)    
Predicted Functional Partners:
ENSNMLP00000019648
DEAQ box RNA-dependent ATPase 1.
   
 0.822
ENSNMLP00000034521
RNA binding motif protein 17.
   
 
 0.768
ENSNMLP00000015281
DEAH (Asp-Glu-Ala-His) box helicase 9.
    
 0.742
ENSNMLP00000005930
U2 small nuclear RNA auxiliary factor 2a.
    
 
 0.736
ENSNMLP00000022332
Splicing factor 1.
   
 0.666
ENSNMLP00000042359
Protein phosphatase 1, regulatory subunit 10.
   
 0.666
ENSNMLP00000017874
LEM domain containing 3.
   
  0.661
ENSNMLP00000000406
RNA binding motif protein 25a.
   
 
 0.613
ENSNMLP00000015287
annotation not available
   
 
 0.613
ENSNMLP00000015434
annotation not available
   
 
  0.520
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.