STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000016149OTU deubiquitinase 3. (352 aa)    
Predicted Functional Partners:
ENSNMLP00000004363
Mitochondrial ribosomal protein L20.
  
 
 0.979
ENSNMLP00000005295
Mitochondrial ribosomal protein L32.
  
 
 0.979
ENSNMLP00000043013
Mitochondrial ribosomal protein S6.
  
 
 0.978
ENSNMLP00000000565
Ribosomal protein L23.
   
 
 0.976
ENSNMLP00000000678
Ribosomal protein L11.
   
 
 0.976
ENSNMLP00000009457
Mitochondrial ribosomal protein S9.
  
 
 0.976
ENSNMLP00000041073
Si:dkey-159f12.2.
   
 
 0.976
ENSNMLP00000026289
Ribosomal protein S18.
    
 
 0.974
ENSNMLP00000032458
Ribosomal protein S3.
   
 
 0.974
ENSNMLP00000028214
Ribosomal protein L10a.
   
 
 0.968
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.