STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000016273BAH domain and coiled-coil containing 1a. (1957 aa)    
Predicted Functional Partners:
ENSNMLP00000010236
annotation not available
    
 0.880
ENSNMLP00000012382
annotation not available
    
  0.871
ENSNMLP00000024830
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
  0.833
ENSNMLP00000015658
annotation not available
   
 
 0.755
ENSNMLP00000022688
SIN3-HDAC complex associated factor.
    
 
 0.728
MTERF1
Mitochondrial transcription termination factor 1.
   
    0.665
ENSNMLP00000036706
Mitochondrial transcription termination factor 2.
   
    0.665
ENSNMLP00000044145
annotation not available
   
    0.665
ENSNMLP00000035363
Aspartyl aminopeptidase.
    
 
 0.638
ENSNMLP00000015002
SIN3-HDAC complex associated factor, like.
    
 
 0.625
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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