STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000016276General transcription factor IIF, polypeptide 1. (481 aa)    
Predicted Functional Partners:
ENSNMLP00000005160
Polymerase (RNA) II (DNA directed) polypeptide B.
   
 0.998
ENSNMLP00000021600
Polymerase (RNA) II (DNA directed) polypeptide I.
   
 0.998
ENSNMLP00000033523
Polymerase (RNA) II (DNA directed) polypeptide C.
    
 0.997
ENSNMLP00000019950
CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1.
   
 0.996
ENSNMLP00000031971
General transcription factor IIE, polypeptide 2, beta.
   
 0.996
ENSNMLP00000043771
General transcription factor IIE, polypeptide 1, alpha.
    
 0.996
ENSNMLP00000027278
General transcription factor IIB.
    
 0.995
ENSNMLP00000030491
Polymerase (RNA) II (DNA directed) polypeptide G-like.
   
 0.995
ENSNMLP00000017292
General transcription factor IIA, 2.
    
 0.994
ENSNMLP00000032391
General transcription factor IIH, polypeptide 4.
    
 0.994
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.