STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000016690Integrin alpha FG-GAP repeat containing 1. (546 aa)    
Predicted Functional Partners:
ENSNMLP00000016429
Phosphorylase kinase, beta.
   
  
 0.571
SOGA1
Suppressor of glucose, autophagy associated 1.
      
 0.521
ENSNMLP00000019358
Proteasome maturation protein.
      
 0.511
ENSNMLP00000042509
Programmed cell death 2.
      
 0.468
ENSNMLP00000013921
DENN/MADD domain containing 5A.
      
 0.414
ENSNMLP00000044099
annotation not available
      
 0.414
ENSNMLP00000001714
Periplakin.
      
 0.410
ENSNMLP00000029148
RuvB-like AAA ATPase 1.
    
 
 0.409
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.