STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSNMLP00000016867DEAD (Asp-Glu-Ala-Asp) box polypeptide 52. (601 aa)    
Predicted Functional Partners:
ENSNMLP00000010819
UTP3 small subunit processome component.
   
 0.999
ENSNMLP00000012848
NOP14 nucleolar protein homolog (yeast).
   
 
 0.996
ENSNMLP00000002842
annotation not available
   
 0.995
ENSNMLP00000017762
Bystin-like.
   
 0.995
ENSNMLP00000002157
DEAD (Asp-Glu-Ala-Asp) box polypeptide 10.
  
0.993
ENSNMLP00000044995
Ddb1 and cul4 associated factor 13.
   
 0.993
ENSNMLP00000024121
WD repeat domain 46.
   
 
 0.992
ENSNMLP00000000482
DEAD (Asp-Glu-Ala-Asp) box polypeptide 47.
  
0.991
ENSNMLP00000005429
PWP2 small subunit processome component.
   
 0.991
ENSNMLP00000031595
NOP58 ribonucleoprotein homolog (yeast).
   
 0.991
Your Current Organism:
Neogobius melanostomus
NCBI taxonomy Id: 47308
Other names: Apollonia melanostoma, Apollonia melanostomus, Gobius melanostomus, N. melanostomus, round goby
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.